runExperiment into a long table.experimentToTable.RdTakes the output of runExperiment, extracts the dataframes containing the ecological memory patterns generated by computeMemory, and binds them together into a single dataframe ready for further analyses or plotting.
experimentToTable( experiment.output = NULL, parameters.file = NULL, sampling.names = NULL, R2 = TRUE )
| experiment.output | list, output of |
|---|---|
| parameters.file | dataframe of simulation parameters. |
| sampling.names | vector of character strings with the names of the columns of |
| R2 | boolean. If TRUE, the average pseudo R-squared of the random forest models used to analyze the ecological memory pattern of the virtual taxa are shown with the taxon traits. |
A dataframe.
This function is used internally by plotExperiment, but it is also available to users in case they want to do other kinds of analyses or plots with the data.